Journal article
Fast approximate simulation of finite long-range spin systems
R McVinish, L Hodgkinson
Annals of Applied Probability | INST MATHEMATICAL STATISTICS-IMS | Published : 2021
DOI: 10.1214/20-AAP1624
Abstract
Tau leaping is a popular method for performing fast approximate simulation of certain continuous time Markov chain models typically found in chemistry and biochemistry. This method is known to perform well when the transition rates satisfy some form of scaling behaviour. In a similar spirit to tau leaping, we propose a new method for approximate simulation of spin systems which approximates the evolution of spin at each site between sampling epochs as an independent two-state Markov chain. When combined with fast summation methods, our method offers considerable improvement in speed over the standard Doob-Gillespie algorithm. We provide a detailed analysis of the error incurred for both the ..
View full abstractGrants
Awarded by Australian Research Council
Funding Acknowledgements
The second author was supported by an Australian Postgraduate Award. All authors are supported in part by the Australian Research Council (Discovery Grant DP150101459 and the ARC Centre of Excellence for Mathematical and Statistical Frontiers, CE140100049).